Suchergebnisse: DNA sequence alignment

Sigma-2: Multiple sequence alignment of non-coding DNA via an evolutionary model

Jayaraman, Gayathri ; Siddharthan, Rahul

Cryptic species in a well-known habitat – applying taxonomics to the amphipod genus Epimeria (Crustacea, Peracarida)

Beermann, Jan ; Westbury, Michael ; Hofreiter, Michael ; Hilgers, Leon ; Deister, Fabian ; Neumann, Hermann ; Raupach, Michael 2020 Universität Potsdam

Quantifying and reducing spurious alignments for the analysis of ultra-short ancient DNA sequences

de Filippo, Cesare ; Meyer, Matthias ; Prüfer, Kay

A Heuristic Bayesian Method for Segmenting DNA Sequence Alignments and Detecting Evidence for Recombination and Gene Conversion

Kedzierska, Anna ; Husmeier, Dirk

Addressing the Shortcomings of Three Recent Bayesian Methods for Detecting Interspecific Recombination in DNA Sequence Alignments

Husmeier, Dirk ; Mantzaris, Alexander V.

A Context Dependent Pair Hidden Markov Model for Statistical Alignment

Arribas-Gil, Ana ; Matias, Catherine

Bioinformatics and the Cell – Modern Computational Approaches in Genomics, Proteomics and Transcriptomics

Xia, Xuhua 2018 Springer International Publishing

GPU acceleration for DNA sequence alignment algorithm and its application

Zhong, Heming ; Pan, Xiaojian ; He, Zengquang ; Wang, Haoling ; Huang, Dan ; Chen, Zhiguang

A mitogenomic timetree for Darwin's enigmatic South American mammal Macrauchenia patachonica

Westbury, Michael ; Baleka, Sina Isabelle ; Barlow, Axel ; Hartmann, Stefanie ; Paijmans, Johanna L.A. ; Kramarz, Alejandro ; Forasiepi, Analía M. ; Bond, Mariano ; Gelfo, Javier N. ; Reguero, Marcelo A. ; López-Mendoza, Patricio ; Taglioretti, Matias ; Scaglia, Fernando ; Rinderknecht, Andrés ; Jones, Washington ; Mena, Francisco ; Billet, Guillaume ; de Muizon, Christian ; Aguilar, José Luis ; MacPhee, Ross D.E. ; Hofreiter, Michael 2019 Universität Potsdam

Hypermethylation of the non-imprinted maternal MEG3 and paternal MEST alleles is highly variable among normal individuals

Haertle, Larissa ; Maierhofer, Anna ; Böck, Julia ; Lehnen, Harald ; Böttcher, Yvonne ; Blüher, Matthias ; Schorsch, Martin ; Potabattula, Ramya ; El Hajj, Nady ; Appenzeller, Silke ; Haaf, Thomas 2019 Universität Würzburg

Diversification and molecular evolution of ATOH8, a gene encoding a bHLH transcription factor

Chen, Jingchen ; Dai, Fangping ; Balakrishnan-Renuka, Ajeesh ; Leese, Florian ; Schempp, Werner ; Schaller, Felix ; Hoffmann, Michael Marcus ; Morosan-Puopolo, Gabriela ; Yusuf, Faisal ; Bisschoff, Izak Johannes ; Chankiewitz, Verena ; Xue, Jinglun ; Chen, Jingzhong ; Ying, Kang ; Brand-Saberi, Beate 2011 Ruhr-Universität Bochum

Palaeogenomes of Eurasian straight-tusked elephants challenge the current view of elephant evolution

Meyer, Matthias ; Palkopoulou, Eleftheria ; Baleka, Sina Isabelle ; Stiller, Mathias ; Penkman, Kirsty E. H. ; Alt, Kurt W. ; Ishida, Yasuko ; Mania, Dietrich ; Mallick, Swapan ; Meijer, Tom ; Meller, Harald ; Nagel, Sarah ; Nickel, Birgit ; Ostritz, Sven ; Rohland, Nadin ; Schauer, Karol ; Schüler, Tim ; Roca, Alfred L. ; Reich, David ; Shapiro, Beth ; Hofreiter, Michael 2019 Universität Potsdam

Aligning Flowgrams to DNA Sequences

Martin, Marcel ; Rahmann, Sven 2013 Schloss Dagstuhl – Leibniz-Zentrum für Informatik

Read mapping

Hoffmann, Steve ; Stadler, Peter F.

Effective delta-labeling exploration algorithms for graph representation and DNA sequence alignment

Sethukkarasi, A. ; Vidyanandini, S. ; El-Mesady, A.

A local algorithm for DNA sequence alignment with inversions

Schöniger, Michael ; Waterman, Michael S.

Pairwise alignment of the DNA sequence using hypercomplex number representation

Shu, Jian-Jun ; Ouw, Li Shan

TreeWave: command line tool for alignment-free phylogeny reconstruction based on graphical representation of DNA sequences and genomic signal processing

Boumajdi, Nasma ; Bendani, Houda ; Belyamani, Lahcen ; Ibrahimi, Azeddine