„Alignment“

Suchergebnisse

8.216 Treffer

• Subcellular location prediction of proteins using support vector machines with alignment of block sequences utilizing amino acid composition
  Tamura, Takeyuki ; Akutsu, Tatsuya
• Improving model construction of profile HMMs for remote homology detection through structural alignment
  Bernardes, Juliana S. ; Dávila, Alberto MR ; Costa, Vítor S. ; Zaverucha, Gerson
• SABERTOOTH: protein structural alignment based on a vectorial structure representation
  Teichert, Florian ; Bastolla, Ugo ; Porto, Markus
• Prediction of MHC class II binding affinity using SMM-align, a novel stabilization matrix alignment method
  Nielsen, Morten ; Lundegaard, Claus ; Lund, Ole
• Considerations in the identification of functional RNA structural elements in genomic alignments
  Babak, Tomas ; Blencowe, Benjamin J. ; Hughes, Timothy R.
• Predicting and improving the protein sequence alignment quality by support vector regression
  Lee, Minho ; Jeong, Chan-seok ; Kim, Dongsup
• How accurately is ncRNA aligned within whole-genome multiple alignments?
  Wang, Adrienne X. ; Ruzzo, Walter L. ; Tompa, Martin
• Can Clustal-style progressive pairwise alignment of multiple sequences be used in RNA secondary structure prediction?
  Bellamy-Royds, Amelia B. ; Turcotte, Marcel
• Topology independent protein structural alignment
  Dundas, Joe ; Binkowski, TA ; DasGupta, Bhaskar ; Liang, Jie
• PFAAT version 2.0: A tool for editing, annotating, and analyzing multiple sequence alignments
  Caffrey, Daniel R. ; Dana, Paul H. ; Mathur, Vidhya ; Ocano, Marco ; Hong, Eun-Jong ; Wang, Yaoyu E. ; Somaroo, Shyamal ; Caffrey, Brian E. ; Potluri, Shobha ; Huang, Enoch S.
• Multiple non-collinear TF-map alignments of promoter regions
  Blanco, Enrique ; Guigo, Roderic ; Messeguer, Xavier
• ASH structure alignment package: Sensitivity and selectivity in domain classification
  Standley, Daron M. ; Toh, Hiroyuki ; Nakamura, Haruki
• MaxAlign: maximizing usable data in an alignment
  Gouveia-Oliveira, Rodrigo ; Sackett, Peter W. ; Pedersen, Anders G.
• Comparison of protein structures by growing neighborhood alignments
  Bhattacharya, Sourangshu ; Bhattacharyya, Chiranjib ; Chandra, Nagasuma R.
• A dynamic programming approach for the alignment of signal peaks in multiple gas chromatography-mass spectrometry experiments
  Robinson, Mark D. ; De Souza, David P. ; Keen, Woon Wai ; Saunders, Eleanor C. ; McConville, Malcolm J. ; Speed, Terence P. ; Likić, Vladimir A.
• Accuracy of structure-based sequence alignment of automatic methods
  Kim, Changhoon ; Lee, Byungkook
• A cross-species alignment tool (CAT)
  Li, Heng ; Guan, Liang ; Liu, Tao ; Guo, Yiran ; Zheng, Wei-Mou ; Wong, Gane Ka-Shu ; Wang, Jun
• SAMPI: Protein Identification with Mass Spectra Alignments
  Kaltenbach, Hans-Michael ; Wilke, Andreas ; Böcker, Sebastian
• Comparing sequences without using alignments: application to HIV/SIV subtyping
  Didier, Gilles ; Debomy, Laurent ; Pupin, Maude ; Zhang, Ming ; Grossmann, Alexander ; Devauchelle, Claudine ; Laprevotte, Ivan
• Convergent algorithms for protein structural alignment
  Martínez, Leandro ; Andreani, Roberto ; Martínez, José Mario