„Alignment“

Suchergebnisse

8.216 Treffer

• Scalable global alignment for multiple biological networks
  Shih, Yu-Keng ; Parthasarathy, Srinivasan
• Amino acid function and docking site prediction through combining disease variants, structure alignments, sequence alignments, and molecular dynamics: a study of the HMG domain
  Prokop, Jeremy W. ; Leeper, Thomas C. ; Duan, Zhong-Hui ; Milsted, Amy
• Multiple genome comparison based on overlap regions of pairwise local alignments
  Jahn, Katharina ; Sudek, Henner ; Stoye, Jens
• Inferences from structural comparison: flexibility, secondary structure wobble and sequence alignment optimization
  Zhang, Gaihua ; Su, Zhen
• Oculus: faster sequence alignment by streaming read compression
  Veeneman, Brendan A. ; Iyer, Matthew K. ; Chinnaiyan, Arul M.
• Coupling SIMD and SIMT architectures to boost performance of a phylogeny-aware alignment kernel
  Alachiotis, Nikolaos ; Berger, Simon A. ; Stamatakis, Alexandros
• Multiple structure alignment with msTALI
  Shealy, Paul ; Valafar, Homayoun
• MergeAlign: improving multiple sequence alignment performance by dynamic reconstruction of consensus multiple sequence alignments
  Collingridge, Peter W. ; Kelly, Steven
• Formatt: Correcting protein multiple structural alignments by incorporating sequence alignment
  Daniels, Noah M. ; Nadimpalli, Shilpa ; Cowen, Lenore J.
• AGORA: Assembly Guided by Optical Restriction Alignment
  Lin, Henry C. ; Goldstein, Steve ; Mendelowitz, Lee ; Zhou, Shiguo ; Wetzel, Joshua ; Schwartz, David C. ; Pop, Mihai
• Automatic classification of protein structures relying on similarities between alignments
  Santini, Guillaume ; Soldano, Henry ; Pothier, Joël
• GenNon-h: Generating multiple sequence alignments on nonhomogeneous phylogenetic trees
  Kedzierska, Anna M. ; Casanellas, Marta
• The tree alignment problem
  Varón, Andrés ; Wheeler, Ward C.
• Highly improved homopolymer aware nucleotide-protein alignments with 454 data
  Lysholm, Fredrik
• Fast and robust multiple sequence alignment with phylogeny-aware gap placement
  Szalkowski, Adam M.
• Mapping single molecule sequencing reads using basic local alignment with successive refinement (BLASR): application and theory
  Chaisson, Mark J. ; Tesler, Glenn
• STELLAR: fast and exact local alignments
  Kehr, Birte ; Weese, David ; Reinert, Knut
• MUCHA: multiple chemical alignment algorithm to identify building block substructures of orphan secondary metabolites
  Kotera, Masaaki ; Tokimatsu, Toshiaki ; Kanehisa, Minoru ; Goto, Susumu
• PicXAA-R: Efficient structural alignment of multiple RNA sequences using a greedy approach
  Sahraeian, Sayed Mohammad Ebrahim ; Yoon, Byung-Jun
• Fast and accurate clustering of noncoding RNAs using ensembles of sequence alignments and secondary structures
  Saito, Yutaka ; Sato, Kengo ; Sakakibara, Yasubumi