„combinatorial algorithm“

Suchergebnisse

8.292 Treffer

• Optimizing amino acid substitution matrices with a local alignment kernel
  Saigo, Hiroto ; Vert, Jean-Philippe ; Akutsu, Tatsuya
• GNU polyxmass: a software framework for mass spectrometric simulations of linear (bio-)polymeric analytes
  Rusconi, Filippo
• Chromosomal patterns of gene expression from microarray data: methodology, validation and clinical relevance in gliomas
  Turkheimer, Federico E. ; Roncaroli, Federico ; Hennuy, Benoit ; Herens, Christian ; Nguyen, Minh ; Martin, Didier ; Evrard, Annick ; Bours, Vincent ; Boniver, Jacques ; Deprez, Manuel
• iHAP – integrated haplotype analysis pipeline for characterizing the haplotype structure of genes
  Song, Chun Meng ; Yeo, Boon Huat ; Tantoso, Erwin ; Yang, Yuchen ; Lim, Yun Ping ; Li, Kuo-Bin ; Rajagopal, Gunaretnam
• Improvement in accuracy of multiple sequence alignment using novel group-to-group sequence alignment algorithm with piecewise linear gap cost
  Yamada, Shinsuke ; Gotoh, Osamu ; Yamana, Hayato
• Integrated siRNA design based on surveying of features associated with high RNAi effectiveness
  Gong, Wuming ; Ren, Yongliang ; Xu, Qiqi ; Wang, Yejun ; Lin, Dong ; Zhou, Haiyan ; Li, Tongbin
• Novel methods for secondary structure determination using low wavelength (VUV) circular dichroism spectroscopic data
  Lees, Jonathan G. ; Miles, Andrew J. ; Janes, Robert W. ; Wallace, B A.
• Systematic assignment of thermodynamic constraints in metabolic network models
  Kümmel, Anne ; Panke, Sven ; Heinemann, Matthias
• Protein secondary structure prediction for a single-sequence using hidden semi-Markov models
  Aydin, Zafer ; Altunbasak, Yucel ; Borodovsky, Mark
• Detection of non-coding RNAs on the basis of predicted secondary structure formation free energy change
  Uzilov, Andrew V. ; Keegan, Joshua M. ; Mathews, David H.
• INTEGRATOR: interactive graphical search of large protein interactomes over the Web
  Chang, Aaron N. ; McDermott, Jason ; Frazier, Zachary ; Guerquin, Michal ; Samudrala, Ram
• Sigma: multiple alignment of weakly-conserved non-coding DNA sequence
  Siddharthan, Rahul
• How to decide? Different methods of calculating gene expression from short oligonucleotide array data will give different results
  Millenaar, Frank F. ; Okyere, John ; May, Sean T. ; van Zanten, Martijn ; Voesenek, Laurentius ACJ ; Peeters, Anton JM
• Effect of data normalization on fuzzy clustering of DNA microarray data
  Kim, Seo Young ; Lee, Jae Won ; Bae, Jong Sung
• STAR: predicting recombination sites from amino acid sequence
  Bauer, Denis C. ; Bodén, Mikael ; Thier, Ricarda ; Gillam, Elizabeth M.
• Rank-statistics based enrichment-site prediction algorithm developed for chromatin immunoprecipitation on chip experiments
  Ghosh, Srinka ; Hirsch, Heather A. ; Sekinger, Edward ; Struhl, Kevin ; Gingeras, Thomas R.
• M-GCAT: interactively and efficiently constructing large-scale multiple genome comparison frameworks in closely related species
  Treangen, Todd J. ; Messeguer, Xavier
• Detection of prokaryotic promoters from the genomic distribution of hexanucleotide pairs
  Jacques, Pierre-Étienne ; Rodrigue, Sébastien ; Gaudreau, Luc ; Goulet, Jean ; Brzezinski, Ryszard
• Efficient pairwise RNA structure prediction and alignment using sequence alignment constraints
  Dowell, Robin D. ; Eddy, Sean R.
• Predicting transcription factor binding sites using local over-representation and comparative genomics
  Defrance, Matthieu ; Touzet, Hélène