„sequence alignment“

Suchergebnisse

600 Treffer

• PFAAT version 2.0: A tool for editing, annotating, and analyzing multiple sequence alignments
  Caffrey, Daniel R. ; Dana, Paul H. ; Mathur, Vidhya ; Ocano, Marco ; Hong, Eun-Jong ; Wang, Yaoyu E. ; Somaroo, Shyamal ; Caffrey, Brian E. ; Potluri, Shobha ; Huang, Enoch S.
• Accuracy of structure-based sequence alignment of automatic methods
  Kim, Changhoon ; Lee, Byungkook
• Comparing sequences without using alignments: application to HIV/SIV subtyping
  Didier, Gilles ; Debomy, Laurent ; Pupin, Maude ; Zhang, Ming ; Grossmann, Alexander ; Devauchelle, Claudine ; Laprevotte, Ivan
• Lower bounds on multiple sequence alignment using exact 3-way alignment
  Colbourn, Charles J. ; Kumar, Sudhir
• Subfamily logos: visualization of sequence deviations at alignment positions with high information content
  Beitz, Eric
• Quantification of the variation in percentage identity for protein sequence alignments
  Raghava, GPS ; Barton, Geoffrey J.
• Improvement in accuracy of multiple sequence alignment using novel group-to-group sequence alignment algorithm with piecewise linear gap cost
  Yamada, Shinsuke ; Gotoh, Osamu ; Yamana, Hayato
• Sigma: multiple alignment of weakly-conserved non-coding DNA sequence
  Siddharthan, Rahul
• Efficient pairwise RNA structure prediction and alignment using sequence alignment constraints
  Dowell, Robin D. ; Eddy, Sean R.
• MCALIGN2: Faster, accurate global pairwise alignment of non-coding DNA sequences based on explicit models of indel evolution
  Wang, Jun ; Keightley, Peter D. ; Johnson, Toby
• The accuracy of several multiple sequence alignment programs for proteins
  Nuin, Paulo AS ; Wang, Zhouzhi ; Tillier, Elisabeth RM
• State of the art: refinement of multiple sequence alignments
  Chakrabarti, Saikat ; Lanczycki, Christopher J. ; Panchenko, Anna R. ; Przytycka, Teresa M. ; Thiessen, Paul A. ; Bryant, Stephen H.
• SinicView: A visualization environment for comparisons of multiple nucleotide sequence alignment tools
  Shih, Arthur Chun-Chieh ; Lee, DT ; Lin, Laurent ; Peng, Chin-Lin ; Chen, Shiang-Heng ; Wu, Yu-Wei ; Wong, Chun-Yi ; Chou, Meng-Yuan ; Shiao, Tze-Chang ; Hsieh, Mu-Fen
• Choosing the best heuristic for seeded alignment of DNA sequences
  Sun, Yanni ; Buhler, Jeremy
• MACSIMS : multiple alignment of complete sequences information management system
  Thompson, Julie D. ; Muller, Arnaud ; Waterhouse, Andrew ; Procter, Jim ; Barton, Geoffrey J. ; Plewniak, Frédéric ; Poch, Olivier
• Evaluation of sequence alignments and oligonucleotide probes with respect to three-dimensional structure of ribosomal RNA using ARB software package
  Kumar, Yadhu ; Westram, Ralf ; Kipfer, Peter ; Meier, Harald ; Ludwig, Wolfgang
• Distinguishing between enzyme sequences & non-enzymes without using alignments
  Sangaralingam, Ajanthah ; Doig, Andrew J.
• Jalview: Visualization and Analysis of Molecular Sequences, Alignments, and Structures
  Waterhouse, Andrew ; Procter, Jim ; Martin, David A. ; Barton, Geoffrey J.
• Evolutionary distance estimation and fidelity of pair wise sequence alignment
  Rosenberg, Michael S.
• Kalign – an accurate and fast multiple sequence alignment algorithm
  Lassmann, Timo ; Sonnhammer, Erik LL