„Annotation“

Suchergebnisse

5.287 Treffer

• ArrayPlex: distributed, interactive and programmatic access to genome sequence, annotation, ontology, and analytical toolsets
  Killion, Patrick J. ; Iyer, Vishwanath R.
• Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments
  Haas, Brian J. ; Salzberg, Steven L. ; Zhu, Wei ; Pertea, Mihaela ; Allen, Jonathan E. ; Orvis, Joshua ; White, Owen ; Buell, C Robin ; Wortman, Jennifer R.
• The SeqFEATURE library of 3D functional site models: comparison to existing methods and applications to protein function annotation
  Wu, Shirley ; Liang, Mike P. ; Altman, Russ B.
• Analysis of 14 BAC sequences from the Aedes aegyptigenome: a benchmark for genome annotation and assembly
  Lobo, Neil F. ; Campbell, Kathy S. ; Thaner, Daniel ; deBruyn, Becky ; Koo, Hean ; Gelbart, William M. ; Loftus, Brendan J. ; Severson, David W. ; Collins, Frank H.
• An annotation infrastructure for the analysis and interpretation of Affymetrix exon array data
  Okoniewski, Michał J. ; Yates, Tim ; Dibben, Siân ; Miller, Crispin J.
• PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation
  Portales-Casamar, Elodie ; Kirov, Stefan ; Lim, Jonathan ; Lithwick, Stuart ; Swanson, Magdalena I. ; Ticoll, Amy ; Snoddy, Jay ; Wasserman, Wyeth W.
• Genome re-annotation: a wiki solution?
  Salzberg, Steven L.
• GENECODIS: a web-based tool for finding significant concurrent annotations in gene lists
  Carmona-Saez, Pedro ; Chagoyen, Monica ; Tirado, Francisco ; Carazo, Jose M. ; Pascual-Montano, Alberto
• Pairagon+N-SCAN_EST: a model-based gene annotation pipeline
  Arumugam, Manimozhiyan ; Wei, Chaochun ; Brown, Randall H. ; Brent, Michael R.
• AceView: a comprehensive cDNA-supported gene and transcripts annotation
  Thierry-Mieg, Danielle ; Thierry-Mieg, Jean
• Automatic annotation of eukaryotic genes, pseudogenes and promoters
  Solovyev, Victor ; Kosarev, Peter ; Seledsov, Igor ; Vorobyev, Denis
• GENCODE: producing a reference annotation for ENCODE
  Harrow, Jennifer ; Denoeud, France ; Frankish, Adam ; Reymond, Alexandre ; Chen, Chao-Kung ; Chrast, Jacqueline ; Lagarde, Julien ; Gilbert, James GR ; Storey, Roy ; Swarbreck, David ; Rossier, Colette ; Ucla, Catherine ; Hubbard, Tim ; Antonarakis, Stylianos E. ; Guigo, Roderic
• yrGATE: a web-based gene-structure annotation tool for the identification and dissemination of eukaryotic genes
  Wilkerson, Matthew D. ; Schlueter, Shannon D. ; Brendel, Volker
• Reference based annotation with GeneMapper
  Chatterji, Sourav ; Pachter, Lior
• The Sequence Ontology: a tool for the unification of genome annotations
  Eilbeck, Karen ; Lewis, Suzanna E. ; Mungall, Christopher J. ; Yandell, Mark ; Stein, Lincoln ; Durbin, Richard ; Ashburner, Michael
• Molecular processes during fat cell development revealed by gene expression profiling and functional annotation
  Hackl, Hubert ; Burkard, Thomas Rainer ; Sturn, Alexander ; Rubio, Renee ; Schleiffer, Alexander ; Tian, Sun ; Quackenbush, John ; Eisenhaber, Frank ; Trajanoski, Zlatko
• A genome annotation-driven approach to cloning the human ORFeome
  Collins, John E. ; Wright, Charmain L. ; Edwards, Carol A. ; Davis, Matthew P. ; Grinham, James A. ; Cole, Charlotte G. ; Goward, Melanie E. ; Aguado, Begoña ; Mallya, Meera ; Mokrab, Younes ; Huckle, Elizabeth J. ; Beare, David M. ; Dunham, Ian
• An integrated gene annotation and transcriptional profiling approach towards the full gene content of the Drosophila genome
  Hild, M. ; Beckmann, B. ; Haas, SA ; Koch, B. ; Solovyev, V. ; Busold, C. ; Fellenberg, K. ; Boutros, M. ; Vingron, M. ; Sauer, F. ; Hoheisel, JD ; Paro, R.
• DAVID: Database for Annotation, Visualization, and Integrated Discovery
  Dennis, Glynn ; Sherman, Brad T. ; Hosack, Douglas A. ; Yang, Jun ; Gao, Wei ; Lane, H Clifford ; Lempicki, Richard A.
• Reinvestigation of the Saccharomyces cerevisiae genome annotation by comparison to the genome of a related fungus: Ashbya gossypii
  Brachat, Sophie ; Dietrich, Fred S. ; Voegeli, Sylvia ; Zhang, Zhihong ; Stuart, Larissa ; Lerch, Anita ; Gates, Krista ; Gaffney, Tom ; Philippsen, Peter