„sequence alignment“

Suchergebnisse

600 Treffer

• Parallel algorithms for large-scale biological sequence alignment on Xeon-Phi based clusters
  Lan, Haidong ; Chan, Yuandong ; Xu, Kai ; Schmidt, Bertil ; Peng, Shaoliang ; Liu, WeiGuo
• LEON-BIS: multiple alignment evaluation of sequence neighbours using a Bayesian inference system
  Vanhoutreve, Renaud ; Kress, Arnaud ; Legrand, Baptiste ; Gass, Hélène ; Poch, Olivier ; Thompson, Julie D.
• Constrained pairwise and center-star sequences alignment problems
  Zhang, Yong ; Chan, Joseph Wun-Tat ; Chin, Francis Y. L. ; Ting, Hing-Fung ; Ye, Deshi ; Zhang, Feng ; Shi, Jianyu
• An effective sequence-alignment-free superpositioning of pairwise or multiple structures with missing data
  Lu, Jianbo ; Xu, Guoliang ; Zhang, Shihua ; Lu, Benzhuo
• Articles selected by Faculty of 1000: archaeal adaptation to cold; human chromosome 7 sequence; comparative protein-structure modeling; new algorithm for sequence alignment; expression profiling human mast cells
• Kraken: ultrafast metagenomic sequence classification using exact alignments
  Wood, Derrick E. ; Salzberg, Steven L.
• Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
  Langmead, Ben ; Trapnell, Cole ; Pop, Mihai ; Salzberg, Steven L.
• A haplome alignment and reference sequence of the highly polymorphic Ciona savignyi genome
  Small, Kerrin S. ; Brudno, Michael ; Hill, Matthew M. ; Sidow, Arend
• Positional effect of phosphorylation sites 266 and 267 in the cytoplasmic domain of the E2 protein of hepatitis C virus 3a genotype: Interferon Resistance analysis via Sequence Alignment
  Rafique, Shazia ; Idrees, Muhammad ; Ilyas, Muhammad ; Hussain, Abrar ; Ali, Muhammad ; Ali, Liaqat ; Butt, Sadia ; Afzal, Samia ; Ur Rehman, Irshad ; Saleem, Sana
• Envelope 2 protein phosphorylation sites S75 & 277 of hepatitis C virus genotype 1a and interferon resistance: A sequence alignment approach
  Afzal, Samia ; Idrees, Muhammad ; Ali, Muhammad ; Ilyas, Muhammad ; Hussain, Abrar ; Akram, Madiha ; Butt, Sadia ; Saleem, Sana ; Rehman, Irshadur ; Ali, Liaqat ; Shahid, Muhammad
• MissMax: alignment-free sequence comparison with mismatches through filtering and heuristics
  Pizzi, Cinzia
• Analyses of the radiation of birnaviruses from diverse host phyla and of their evolutionary affinities with other double-stranded RNA and positive strand RNA viruses using robust structure-based multiple sequence alignments and advanced phylogenetic methods
  Gibrat, Jean-Francois ; Mariadassou, Mahendra ; Boudinot, Pierre ; Delmas, Bernard
• BMGE (Block Mapping and Gathering with Entropy): a new software for selection of phylogenetic informative regions from multiple sequence alignments
  Criscuolo, Alexis ; Gribaldo, Simonetta
• ProfileGrids: a sequence alignment visualization paradigm that avoids the limitations of Sequence Logos
  Roca, Alberto I.
• Sequence Diversity Diagram for comparative analysis of multiple sequence alignments
  Sakai, Ryo ; Aerts, Jan
• A gene-based radiation hybrid map of chicken microchromosome 14: Comparison to human and alignment to the assembled chicken sequence
  Morisson, Mireille ; Leroux, Sophie ; Jiguet-Jiglaire, Carine ; Assaf, Sirine ; Pitel, Frédérique ; Lagarrigue, Sandrine ; Bardes, Suzanne ; Fève, Katia ; Faraut, Thomas ; Milan, Denis ; Vignal, Alain
• Parameter advising for multiple sequence alignment
  DeBlasio, Dan ; Kececioglu, John
• Improving multiple sequence alignment by using better guide trees
  Zhan, Qing ; Ye, Yongtao ; Lam, Tak-Wah ; Yiu, Siu-Ming ; Wang, Yadong ; Ting, Hing-Fung
• Efficient Alignment of RNAs with Pseudoknots Using Sequence Alignment Constraints
  Yoon, Byung-Jun
• Dissecting multiple sequence alignment methods – the analysis, design and development of generic multiple sequence alignment components in SeqAn
  Rausch, Tobias