„combinatorial algorithm“

Suchergebnisse

8.292 Treffer

• Characterizing the state of the art in the computational assignment of gene function: lessons from the first critical assessment of functional annotation (CAFA)
  Gillis, Jesse ; Pavlidis, Paul
• Homology-based inference sets the bar high for protein function prediction
  Hamp, Tobias ; Kassner, Rebecca ; Seemayer, Stefan ; Vicedo, Esmeralda ; Schaefer, Christian ; Achten, Dominik ; Auer, Florian ; Boehm, Ariane ; Braun, Tatjana ; Hecht, Maximilian ; Heron, Mark ; Hönigschmid, Peter ; Hopf, Thomas A. ; Kaufmann, Stefanie ; Kiening, Michael ; Krompass, Denis ; Landerer, Cedric ; Mahlich, Yannick ; Roos, Manfred ; Rost, Burkhard
• Protein function annotation with Structurally Aligned Local Sites of Activity (SALSAs)
  Wang, Zhouxi ; Yin, Pengcheng ; Lee, Joslynn S. ; Parasuram, Ramya ; Somarowthu, Srinivas ; Ondrechen, Mary Jo
• Function prediction from networks of local evolutionary similarity in protein structure
  Erdin, Serkan ; Venner, Eric ; Lisewski, Andreas Martin ; Lichtarge, Olivier
• Functional inference by ProtoNet family tree: the uncharacterized proteome of Daphnia pulex
  Rappoport, Nadav ; Linial, Michal
• How to inherit statistically validated annotation within BAR+ protein clusters
  Piovesan, Damiano ; Martelli, Pier Luigi ; Fariselli, Piero ; Profiti, Giuseppe ; Zauli, Andrea ; Rossi, Ivan ; Casadio, Rita
• Reconstruction of phyletic trees by global alignment of multiple metabolic networks
  Ma, Cheng-Yu ; Lin, Shu-Hsi ; Lee, Chi-Ching ; Tang, Chuan Yi ; Berger, Bonnie ; Liao, Chung-Shou
• Building Markov state models with solvent dynamics
  Gu, Chen ; Chang, Huang-Wei ; Maibaum, Lutz ; Pande, Vijay S. ; Carlsson, Gunnar E. ; Guibas, Leonidas J.
• Widespread evidence of viral miRNAs targeting host pathways
  Carl, Joseph W. ; Trgovcich, Joanne ; Hannenhalli, Sridhar
• Mass spectrometry-based protein identification by integrating de novo sequencing with database searching
  Wang, Penghao ; Wilson, Susan R.
• Characterising RNA secondary structure space using information entropy
  Sükösd, Zsuzsanna ; Knudsen, Bjarne ; Anderson, James WJ ; Novák, Adam ; Kjems, Jørgen ; Pedersen, Christian NS
• Identifying cross-category relations in gene ontology and constructing genome-specific term association networks
  Peng, Jiajie ; Chen, Jin ; Wang, Yadong
• iStable: off-the-shelf predictor integration for predicting protein stability changes
  Chen, Chi-Wei ; Lin, Jerome ; Chu, Yen-Wei
• CoNVEX: copy number variation estimation in exome sequencing data using HMM
  Amarasinghe, Kaushalya C. ; Li, Jason ; Halgamuge, Saman K.
• Molecular docking analysis of 2009-H1N1 and 2004-H5N1 influenza virus HLA-B*4405-restricted HA epitope candidates: implications for TCR cross-recognition and vaccine development
  Su, Chinh TT ; Schönbach, Christian ; Kwoh, Chee-Keong
• Adaptive bi-level programming for optimal gene knockouts for targeted overproduction under phenotypic constraints
  Ren, Shaogang ; Zeng, Bo ; Qian, Xiaoning
• Spiral search: a hydrophobic-core directed local search for simplified PSP on 3D FCC lattice
  Rashid, Mahmood A. ; Newton, MA Hakim ; Hoque, Md Tamjidul ; Shatabda, Swakkhar ; Pham, Duc Nghia ; Sattar, Abdul
• Inferring homologous protein-protein interactions through pair position specific scoring matrix
  Lin, Chun-Yu ; Chen, Yung-Chiang ; Lo, Yu-Shu ; Yang, Jinn-Moon
• An enhanced computational platform for investigating the roles of regulatory RNA and for identifying functional RNA motifs
  Chang, Tzu-Hao ; Huang, Hsi-Yuan ; Hsu, Justin Bo-Kai ; Weng, Shun-Long ; Horng, Jorng-Tzong ; Huang, Hsien-Da
• Sequence-only evolutionary and predicted structural features for the prediction of stability changes in protein mutants
  Folkman, Lukas ; Stantic, Bela ; Sattar, Abdul