„Graph algorithms“

Suchergebnisse

3.156 Treffer

• SPARQLGraph: a web-based platform for graphically querying biological Semantic Web databases
  Schweiger, Dominik ; Trajanoski, Zlatko ; Pabinger, Stephan
• Protein localization prediction using random walks on graphs
  Xu, Xiaohua ; Lu, Lin ; He, Ping ; Chen, Ling
• Sorting genomes with rearrangements and segmental duplications through trajectory graphs
  Shao, Mingfu ; Lin, Yu ; Moret, Bernard
• An efficient and scalable graph modeling approach for capturing information at different levels in next generation sequencing reads
  Warnke, Julia D. ; Ali, Hesham H.
• Detecting recurrent gene mutation in interaction network context using multi-scale graph diffusion
  Babaei, Sepideh ; Hulsman, Marc ; Reinders, Marcel ; Ridder, Jeroen ˜deœ
• Clustering cliques for graph-based summarization of the biomedical research literature
  Zhang, Han ; Fiszman, Marcelo ; Shin, Dongwook ; Wilkowski, Bartlomiej ; Rindflesch, Thomas C.
• Compact representation of k-mer de Bruijn graphs for genome read assembly
  Rødland, Einar Andreas
• A fast weak motif-finding algorithm based on community detection in graphs
  Jia, Caiyan ; Carson, Matthew B. ; Yu, Jian
• Genecentric: a package to uncover graph-theoretic structure in high-throughput epistasis data
  Gallant, Andrew ; Leiserson, Mark DM ; Kachalov, Maxim ; Cowen, Lenore J. ; Hescott, Benjamin J.
• An automated graphics tool for comparative genomics: the Coulson plot generator
  Field, Helen I. ; Coulson, Richard MR ; Field, Mark C.
• Multi-dimensional characterization of electrostatic surface potential computation on graphics processors
  Daga, Mayank ; Feng, Wu-chun
• Efficient path-based computations on pedigree graphs with compact encodings
  Yang, Lei ; Cheng, En ; Özsoyoğlu, Z Meral
• A graph-theoretic approach for inparalog detection
  Tremblay-Savard, Olivier ; Swenson, Krister M.
• BirdsEyeView (BEV): graphical overviews of experimental data
  Zhang, Lifeng ; Berleant, Daniel ; Wang, Yi ; Li, Ling ; Cook, Diane ; Wurtele, Eve Syrkin
• Graph-based signal integration for high-throughput phenotyping
  Herskovic, Jorge R. ; Subramanian, Devika ; Cohen, Trevor ; Bozzo-Silva, Pamela A. ; Bearden, Charles F. ; Bernstam, Elmer V.
• A graph-based approach for designing extensible pipelines
  Rodrigues, Maíra R. ; Magalhães, Wagner CS ; Machado, Moara ; Tarazona-Santos, Eduardo
• Efficient reconstruction of biological networks via transitive reduction on general purpose graphics processors
  Bošnački, Dragan ; Odenbrett, Maximilian R. ; Wijs, Anton ; Ligtenberg, Willem ; Hilbers, Peter
• graphite - a Bioconductor package to convert pathway topology to gene network
  Sales, Gabriele ; Calura, Enrica ; Cavalieri, Duccio ; Romualdi, Chiara
• Multiple graph regularized protein domain ranking
  Wang, Jim Jing-Yan ; Bensmail, Halima ; Gao, Xin
• Graph rigidity reveals well-constrained regions of chromosome conformation embeddings
  Duggal, Geet ; Kingsford, Carl