„Topic-Model“

Suchergebnisse

3.462 Treffer

• Exploiting gene deletion fitness effects in yeast to understand the modular architecture of protein complexes under different growth conditions
  Pache, Roland A. ; Babu, M Madan ; Aloy, Patrick
• Identifying disease-specific genes based on their topological significance in protein networks
  Dezso, Zoltan ; Nikolsky, Yuri ; Nikolskaya, Tatiana ; Miller, Jeremy ; Cherba, David ; Webb, Craig ; Bugrim, Andrej
• FORG3D: Force-directed 3D graph editor for visualization of integrated genome scale data
  Paananen, Jussi ; Wong, Garry
• SNAVI: Desktop application for analysis and visualization of large-scale signaling networks
  Ma'ayan, Avi ; Jenkins, Sherry L. ; Webb, Ryan L. ; Berger, Seth I. ; Purushothaman, Sudarshan P. ; Abul-Husn, Noura S. ; Posner, Jeremy M. ; Flores, Tony ; Iyengar, Ravi
• Flux-sum analysis: a metabolite-centric approach for understanding the metabolic network
  Chung, Bevan Kai Sheng ; Lee, Dong-Yup
• Investigating the robustness of the classical enzyme kinetic equations in small intracellular compartments
  Grima, Ramon
• In silico approaches to study mass and energy flows in microbial consortia: a syntrophic case study
  Taffs, Reed ; Aston, John E. ; Brileya, Kristen ; Jay, Zackary ; Klatt, Christian G. ; McGlynn, Shawn ; Mallette, Natasha ; Montross, Scott ; Gerlach, Robin ; Inskeep, William P. ; Ward, David M. ; Carlson, Ross P.
• The smallest chemical reaction system with bistability
  Wilhelm, Thomas
• From gene expression to gene regulatory networks in Arabidopsis thaliana
  Needham, Chris J. ; Manfield, Iain W. ; Bulpitt, Andrew J. ; Gilmartin, Philip M. ; Westhead, David R.
• Knowledge based identification of essential signaling from genome-scale siRNA experiments
  Bankhead, Armand ; Sach, Iliana ; Ni, Chester ; LeMeur, Nolwenn ; Kruger, Mark ; Ferrer, Marc ; Gentleman, Robert ; Rohl, Carol
• The Symbiosis Interactome: a computational approach reveals novel components, functional interactions and modules in Sinorhizobium meliloti
  Rodriguez-Llorente, Ignacio ; Caviedes, Miguel A. ; Dary, Mohammed ; Palomares, Antonio J. ; Cánovas, Francisco M. ; Peregrín-Alvarez, José M.
• Version control of pathway models using XML patches
  Saffrey, Peter ; Orton, Richard
• Elongation, proliferation & migration differentiate endothelial cell phenotypes and determine capillary sprouting
  Qutub, Amina A. ; Popel, Aleksander S.
• Reconstruction and logical modeling of glucose repression signaling pathways in Saccharomyces cerevisiae
  Christensen, Tobias S. ; Oliveira, Ana Paula ; Nielsen, Jens
• An approach to evaluate the topological significance of motifs and other patterns in regulatory networks
  Goemann, Björn ; Wingender, Edgar ; Potapov, Anatolij P.
• Proteomic and network analysis characterize stage-specific metabolism in Trypanosoma cruzi
  Roberts, Seth B. ; Robichaux, Jennifer L. ; Chavali, Arvind K. ; Manque, Patricio A. ; Lee, Vladimir ; Lara, Ana M. ; Papin, Jason A. ; Buck, Gregory A.
• Recursive regularization for inferring gene networks from time-course gene expression profiles
  Shimamura, Teppei ; Imoto, Seiya ; Yamaguchi, Rui ; Fujita, André ; Nagasaki, Masao ; Miyano, Satoru
• Narrative-based computational modelling of the Gp130/JAK/STAT signalling pathway
  Guerriero, Maria Luisa ; Dudka, Anna ; Underhill-Day, Nicholas ; Heath, John K. ; Priami, Corrado
• Reconstruction of Escherichia coli transcriptional regulatory networks via regulon-based associations
  Zare, Hossein ; Sangurdekar, Dipen ; Srivastava, Poonam ; Kaveh, Mostafa ; Khodursky, Arkady
• Topological and organizational properties of the products of house-keeping and tissue-specific genes in protein-protein interaction networks
  Lin, Wen-hsien ; Liu, Wei-chung ; Hwang, Ming-jing