„combinatorial algorithm“

Suchergebnisse

8.292 Treffer

• Osiris: accessible and reproducible phylogenetic and phylogenomic analyses within the Galaxy workflow management system
  Oakley, Todd H. ; Alexandrou, Markos A. ; Ngo, Roger ; Pankey, M Sabrina ; Churchill, Celia K C. ; Chen, William ; Lopker, Karl B.
• Exploring community structure in biological networks with random graphs
  Sah, Pratha ; Singh, Lisa O. ; Clauset, Aaron ; Bansal, Shweta
• Assessment and refinement of eukaryotic gene structure prediction with gene-structure-aware multiple protein sequence alignment
  Gotoh, Osamu ; Morita, Mariko ; Nelson, David R.
• KRLMM: an adaptive genotype calling method for common and low frequency variants
  Liu, Ruijie ; Dai, Zhiyin ; Yeager, Meredith ; Irizarry, Rafael A. ; Ritchie, Matthew E.
• A resource-saving collective approach to biomedical semantic role labeling
  Tsai, Richard Tzong-Han ; Lai, Po-Ting
• DMRforPairs: identifying Differentially Methylated Regions between unique samples using array based methylation profiles
  Rijlaarsdam, Martin A. ; van der Zwan, Yvonne G. ; Dorssers, Lambert CJ ; Looijenga, Leendert HJ
• An R package that automatically collects and archives details for reproducible computing
  Liu, Zhifa ; Pounds, Stan
• Probabilistic drug connectivity mapping
  Parkkinen, Juuso A. ; Kaski, Samuel
• SMOQ: a tool for predicting the absolute residue-specific quality of a single protein model with support vector machines
  Cao, Renzhi ; Wang, Zheng ; Wang, Yiheng ; Cheng, Jianlin
• Metavir 2: new tools for viral metagenome comparison and assembled virome analysis
  Roux, Simon ; Tournayre, Jeremy ; Mahul, Antoine ; Debroas, Didier ; Enault, François
• MUBII-TB-DB: a database of mutations associated with antibiotic resistance in Mycobacterium tuberculosis
  Flandrois, Jean-Pierre ; Lina, Gérard ; Dumitrescu, Oana
• Structure and computational analysis of a novel protein with metallopeptidase-like and circularly permuted winged-helix-turn-helix domains reveals a possible role in modified polysaccharide biosynthesis
  Das, Debanu ; Murzin, Alexey G. ; Rawlings, Neil D. ; Finn, Robert D. ; Coggill, Penelope ; Bateman, Alex ; Godzik, Adam ; Aravind, L.
• Transient protein-protein interface prediction: datasets, features, algorithms, and the RAD-T predictor
  Bendell, Calem J. ; Liu, Shalon ; Aumentado-Armstrong, Tristan ; Istrate, Bogdan ; Cernek, Paul T. ; Khan, Samuel ; Picioreanu, Sergiu ; Zhao, Michael ; Murgita, Robert A.
• Bioinformatics analysis of transcriptional regulation of circadian genes in rat liver
  Nguyen, Tung T. ; Mattick, John SA ; Yang, Qian ; Orman, Mehmet A. ; Ierapetritou, Marianthi G. ; Berthiaume, Francois ; Androulakis, Ioannis P.
• Identification of pathogen genomic variants through an integrated pipeline
  Manary, Micah J. ; Singhakul, Suriya S. ; Flannery, Erika L. ; Bopp, Selina ER ; Corey, Victoria C. ; Bright, Andrew Taylor ; McNamara, Case W. ; Walker, John R. ; Winzeler, Elizabeth A.
• Improving read mapping using additional prefix grams
  Kim, Jongik ; Li, Chen ; Xie, Xiaohui
• SInC: an accurate and fast error-model based simulator for SNPs, Indels and CNVs coupled with a read generator for short-read sequence data
  Pattnaik, Swetansu ; Gupta, Saurabh ; Rao, Arjun A. ; Panda, Binay
• Large-scale combining signals from both biomedical literature and the FDA Adverse Event Reporting System (FAERS) to improve post-marketing drug safety signal detection
  Xu, Rong ; Wang, QuanQiu
• Information compression exploits patterns of genome composition to discriminate populations and highlight regions of evolutionary interest
  Hudson, Nicholas J. ; Porto-Neto, Laercio R. ; Kijas, James ; McWilliam, Sean ; Taft, Ryan J. ; Reverter, Antonio
• Comparison of genotype clustering tools with rare variants
  Perreault, Louis-Philippe Lemieux ; Legault, Marc-André ; Barhdadi, Amina ; Provost, Sylvie ; Normand, Valérie ; Tardif, Jean-Claude ; Dubé, Marie-Pierre