„Topic-Model“

Suchergebnisse

3.462 Treffer

• Designing optimal cell factories: integer programming couples elementary mode analysis with regulation
  Jungreuthmayer, Christian ; Zanghellini, Jürgen
• Analysis of alternative signaling pathways of endoderm induction of human embryonic stem cells identifies context specific differences
  Mathew, Shibin ; Jaramillo, Maria ; Zhang, Xinan ; Zhang, Li Ang ; Soto-Gutierrez, Alejandro ; Banerjee, Ipsita
• Protein stickiness, rather than number of functional protein-protein interactions, predicts expression noise and plasticity in yeast
  Brettner, Leandra M. ; Masel, Joanna
• Identifying targets of multiple co-regulating transcription factors from expression time-series by Bayesian model comparison
  Titsias, Michalis K. ; Honkela, Antti ; Lawrence, Neil D. ; Rattray, Magnus
• Comparative multi-goal tradeoffs in systems engineering of microbial metabolism
  Byrne, David ; Dumitriu, Alexandra ; Segrè, Daniel
• Iteration method for predicting essential proteins based on orthology and protein-protein interaction networks
  Peng, Wei ; Wang, Jianxin ; Wang, Weiping ; Liu, Qing ; Wu, Fang-Xiang ; Pan, Yi
• A regulatory network modeled from wild-type gene expression data guides functional predictions in Caenorhabditis elegans development
  Stigler, Brandilyn ; Chamberlin, Helen M.
• A reaction–diffusion mechanism influences cell lineage progression as a basis for formation, regeneration, and stability of intestinal crypts
  Zhang, Lei ; Lander, Arthur D. ; Nie, Qing
• Integration of time-resolved transcriptomics data with flux-based methods reveals stress-induced metabolic adaptation in Escherichia coli
  Töpfer, Nadine ; Jozefczuk, Szymon ; Nikoloski, Zoran
• Similar temperature dependencies of glycolytic enzymes: an evolutionary adaptation to temperature dynamics?
  Cruz, AnaLuisa B. ; Hebly, Marit ; Duong, Giang-Huong ; Wahl, Sebastian A. ; Pronk, Jack T. ; Heijnen, Joseph J. ; Daran-Lapujade, Pascale ; van Gulik, Walter M.
• A specialized ODE integrator for the efficient computation of parameter sensitivities
  Gonnet, Pedro ; Dimopoulos, Sotiris ; Widmer, Lukas ; Stelling, Jörg
• Stochastic simulations of a synthetic bacteria-yeast ecosystem
  Biliouris, Konstantinos ; Babson, David ; Schmidt-Dannert, Claudia ; Kaznessis, Yiannis N.
• Preeclampsia: a bioinformatics approach through protein-protein interaction networks analysis
  Tejera, Eduardo ; Bernardes, João ; Rebelo, Irene
• HINT: High-quality protein interactomes and their applications in understanding human disease
  Das, Jishnu ; Yu, Haiyuan
• Combinatorial network of transcriptional regulation and microRNA regulation in human cancer
  Yu, Hui ; Tu, Kang ; Wang, Yi-Jie ; Mao, Jun-Zhe ; Xie, Lu ; Li, Yuan-Yuan ; Li, Yi-Xue
• PathCase-SB: integrating data sources and providing tools for systems biology research
  Coskun, Sarp A. ; Qi, Xinjian ; Cakmak, Ali ; Cheng, En ; Cicek, A Ercument ; Yang, Lei ; Jadeja, Rishiraj ; Dash, Ranjan K. ; Lai, Nicola ; Ozsoyoglu, Gultekin ; Ozsoyoglu, Zehra Meral
• Bayesian parameter estimation for nonlinear modelling of biological pathways
  Ghasemi, Omid ; Lindsey, Merry L. ; Yang, Tianyi ; Nguyen, Nguyen ; Huang, Yufei ; Jin, Yu-Fang
• Statistical methods on detecting differentially expressed genes for RNA-seq data
  Chen, Zhongxue ; Liu, Jianzhong ; Ng, Hon Keung Tony ; Nadarajah, Saralees ; Kaufman, Howard L. ; Yang, Jack Y. ; Deng, Youping
• A comprehensive network and pathway analysis of candidate genes in major depressive disorder
  Jia, Peilin ; Kao, Chung-Feng ; Kuo, Po-Hsiu ; Zhao, Zhongming
• Kernelized partial least squares for feature reduction and classification of gene microarray data
  Land, Walker H. ; Qiao, Xingye ; Margolis, Daniel E. ; Ford, William S. ; Paquette, Christopher T. ; Perez-Rogers, Joseph F. ; Borgia, Jeffrey A. ; Yang, Jack Y. ; Deng, Youping