„Topic-Model“

Suchergebnisse

3.462 Treffer

• DREM 2.0: Improved reconstruction of dynamic regulatory networks from time-series expression data
  Schulz, Marcel H. ; Devanny, William E. ; Gitter, Anthony ; Zhong, Shan ; Ernst, Jason ; Bar-Joseph, Ziv
• The Cell Collective: Toward an open and collaborative approach to systems biology
  Helikar, Tomáš ; Kowal, Bryan ; McClenathan, Sean ; Bruckner, Mitchell ; Rowley, Thaine ; Madrahimov, Alex ; Wicks, Ben ; Shrestha, Manish ; Limbu, Kahani ; Rogers, Jim A.
• TIGRESS: Trustful Inference of Gene REgulation using Stability Selection
  Haury, Anne-Claire ; Mordelet, Fantine ; Vera-Licona, Paola ; Vert, Jean-Philippe
• Estimation of dynamic flux profiles from metabolic time series data
  Chou, I-Chun ; Voit, Eberhard O.
• Identification of estrogen responsive genes using esophageal squamous cell carcinoma (ESCC) as a model
  Essack, Magbubah ; MacPherson, Cameron Ross ; Schmeier, Sebastian ; Bajic, Vladimir B.
• Chemoattraction of macrophages by secretory molecules derived from cells expressing the signal peptide of eosinophil cationic protein
  Liu, Yu-Shu ; Tsai, Pei-Wen ; Wang, Yong ; Fan, Tan-chi ; Hsieh, Chia-Hung ; Chang, Margaret Dah-Tsyr ; Pai, Tun-Wen ; Huang, Chien-Fu ; Lan, Chung-Yu ; Chang, Hao-Teng
• Optimized submerged batch fermentation strategy for systems scale studies of metabolic switching in Streptomyces coelicolor A3(2)
  Wentzel, Alexander ; Bruheim, Per ; Øverby, Anders ; Jakobsen, Øyvind M. ; Sletta, Håvard ; Omara, Walid A M. ; Hodgson, David A. ; Ellingsen, Trond E.
• The genetic control of growth rate: a systems biology study in yeast
  Pir, Pınar ; Gutteridge, Alex ; Wu, Jian ; Rash, Bharat ; Kell, Douglas B. ; Zhang, Nianshu ; Oliver, Stephen G.
• An investigation of spatial signal transduction in cellular networks
  Alam-Nazki, Aiman ; Krishnan, J.
• GraphAlignment: Bayesian pairwise alignment of biological networks
  Kolář, Michal ; Meier, Jörn ; Mustonen, Ville ; Lässig, Michael ; Berg, Johannes
• Functional clustering of time series gene expression data by Granger causality
  Fujita, André ; Severino, Patricia ; Kojima, Kaname ; Sato, João Ricardo ; Patriota, Alexandre Galvão ; Miyano, Satoru
• Sets2Networks: network inference from repeated observations of sets
  Clark, Neil R. ; Dannenfelser, Ruth ; Tan, Christopher M. ; Komosinski, Michael E. ; Ma'ayan, Avi
• Centrality-based pathway enrichment: a systematic approach for finding significant pathways dominated by key genes
  Gu, Zuguang ; Liu, Jialin ; Cao, Kunming ; Zhang, Junfeng ; Wang, Jin
• Gene interaction enrichment and network analysis to identify dysregulated pathways and their interactions in complex diseases
  Liu, Yu ; Koyutürk, Mehmet ; Barnholtz-Sloan, Jill S. ; Chance, Mark R.
• MicrobesFlux: a web platform for drafting metabolic models from the KEGG database
  Feng, Xueyang ; Xu, You ; Chen, Yixin ; Tang, Yinjie J.
• Genome-scale modeling using flux ratio constraints to enable metabolic engineering of clostridial metabolism in silico
  McAnulty, Michael J. ; Yen, Jiun Y. ; Freedman, Benjamin G. ; Senger, Ryan S.
• Computational analysis of calcium signaling and membrane electrophysiology in cerebellar Purkinje neurons associated with ataxia
  Brown, Sherry-Ann ; Loew, Leslie M.
• Cancer core modules identification through genomic and transcriptomic changes correlation detection at network level
  Li, Wenting ; Wang, Rui ; Bai, Linfu ; Yan, Zhangming ; Sun, Zhirong
• Spatiotemporal network motif reveals the biological traits of developmental gene regulatory networks in Drosophila melanogaster
  Kim, Man-Sun ; Kim, Jeong-Rae ; Kim, Dongsan ; Lander, Arthur D. ; Cho, Kwang-Hyun
• Identifying MicroRNA-mRNA regulatory network in colorectal cancer by a combination of expression profile and bioinformatics analysis
  Fu, Jihong ; Tang, Wentao ; Du, Peng ; Wang, Guanghui ; Chen, Wei ; Li, Jingming ; Zhu, Yunxiang ; Gao, Jun ; Cui, Long